Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.92■□□□□ 0.62
Sycp1Q62209 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.92■□□□□ 0.62
Sycp1Q62209 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sycp1Q62209 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sycp1Q62209 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.9■□□□□ 0.62
Sycp1Q62209 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.9■□□□□ 0.62
Sycp1Q62209 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.9■□□□□ 0.62
Sycp1Q62209 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sycp1Q62209 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sycp1Q62209 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sycp1Q62209 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sycp1Q62209 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Sycp1Q62209 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.89■□□□□ 0.61
Sycp1Q62209 Gm7638-201ENSMUST00000121348 967 ntBASIC18.89■□□□□ 0.61
Sycp1Q62209 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Sycp1Q62209 Gm30025-201ENSMUST00000218555 728 ntBASIC18.89■□□□□ 0.61
Sycp1Q62209 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.89■□□□□ 0.61
Sycp1Q62209 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sycp1Q62209 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.89■□□□□ 0.61
Sycp1Q62209 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.89■□□□□ 0.61
Sycp1Q62209 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sycp1Q62209 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Sycp1Q62209 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sycp1Q62209 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Sycp1Q62209 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sycp1Q62209 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.88■□□□□ 0.61
Sycp1Q62209 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.88■□□□□ 0.61
Sycp1Q62209 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sycp1Q62209 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sycp1Q62209 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sycp1Q62209 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.87■□□□□ 0.61
Sycp1Q62209 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sycp1Q62209 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.87■□□□□ 0.61
Sycp1Q62209 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sycp1Q62209 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.87■□□□□ 0.61
Sycp1Q62209 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.87■□□□□ 0.61
Sycp1Q62209 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.87■□□□□ 0.61
Sycp1Q62209 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms