Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hif1aQ61221 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Dio3-201ENSMUST00000097228 1449 ntBASIC17.04■□□□□ 0.32
Hif1aQ61221 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.04■□□□□ 0.32
Hif1aQ61221 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.04■□□□□ 0.32
Hif1aQ61221 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hif1aQ61221 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hif1aQ61221 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.03■□□□□ 0.32
Hif1aQ61221 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hif1aQ61221 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.03■□□□□ 0.32
Hif1aQ61221 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.03■□□□□ 0.32
Hif1aQ61221 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.03■□□□□ 0.32
Hif1aQ61221 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hif1aQ61221 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
Hif1aQ61221 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hif1aQ61221 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.03■□□□□ 0.32
Hif1aQ61221 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hif1aQ61221 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hif1aQ61221 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hif1aQ61221 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hif1aQ61221 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Hif1aQ61221 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hif1aQ61221 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.02■□□□□ 0.32
Hif1aQ61221 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.02■□□□□ 0.32
Hif1aQ61221 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.02■□□□□ 0.32
Hif1aQ61221 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.02■□□□□ 0.32
Hif1aQ61221 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hif1aQ61221 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hif1aQ61221 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hif1aQ61221 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Hif1aQ61221 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hif1aQ61221 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hif1aQ61221 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hif1aQ61221 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Hif1aQ61221 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.02■□□□□ 0.31
Hif1aQ61221 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hif1aQ61221 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.01■□□□□ 0.31
Hif1aQ61221 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Hif1aQ61221 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Hif1aQ61221 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hif1aQ61221 Gm21596-201ENSMUST00000178049 1316 ntBASIC17■□□□□ 0.31
Hif1aQ61221 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17■□□□□ 0.31
Hif1aQ61221 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hif1aQ61221 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms