Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.26□□□□□ -0.13
Scarb1Q61009 Gm6365-201ENSMUST00000054711 744 ntBASIC14.26□□□□□ -0.13
Scarb1Q61009 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.25□□□□□ -0.13
Scarb1Q61009 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scarb1Q61009 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scarb1Q61009 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.25□□□□□ -0.13
Scarb1Q61009 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scarb1Q61009 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scarb1Q61009 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb1Q61009 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Scarb1Q61009 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.24□□□□□ -0.13
Scarb1Q61009 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.24□□□□□ -0.13
Scarb1Q61009 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scarb1Q61009 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Scarb1Q61009 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.24□□□□□ -0.13
Scarb1Q61009 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Gm42642-201ENSMUST00000200683 355 ntBASIC14.24□□□□□ -0.13
Scarb1Q61009 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.24□□□□□ -0.13
Scarb1Q61009 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scarb1Q61009 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scarb1Q61009 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scarb1Q61009 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.23□□□□□ -0.13
Scarb1Q61009 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.23□□□□□ -0.13
Scarb1Q61009 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Scarb1Q61009 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.23□□□□□ -0.13
Scarb1Q61009 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.23□□□□□ -0.13
Scarb1Q61009 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.23□□□□□ -0.13
Scarb1Q61009 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scarb1Q61009 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scarb1Q61009 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scarb1Q61009 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scarb1Q61009 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.22□□□□□ -0.13
Scarb1Q61009 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms