Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prdm1Q60636 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm1Q60636 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm1Q60636 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.69■□□□□ 0.74
Prdm1Q60636 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm1Q60636 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.69■□□□□ 0.74
Prdm1Q60636 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm1Q60636 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm1Q60636 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.69■□□□□ 0.74
Prdm1Q60636 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Prdm1Q60636 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Prdm1Q60636 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Prdm1Q60636 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Prdm1Q60636 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Mir1668-201ENSMUST00000184114 107 ntBASIC19.68■□□□□ 0.74
Prdm1Q60636 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Prdm1Q60636 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Prdm1Q60636 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm1Q60636 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.67■□□□□ 0.74
Prdm1Q60636 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.67■□□□□ 0.74
Prdm1Q60636 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Prdm1Q60636 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.67■□□□□ 0.74
Prdm1Q60636 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.67■□□□□ 0.74
Prdm1Q60636 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.67■□□□□ 0.74
Prdm1Q60636 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.67■□□□□ 0.74
Prdm1Q60636 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Prdm1Q60636 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.67■□□□□ 0.74
Prdm1Q60636 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm1Q60636 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Prdm1Q60636 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Prdm1Q60636 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.66■□□□□ 0.74
Prdm1Q60636 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.66■□□□□ 0.74
Prdm1Q60636 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prdm1Q60636 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prdm1Q60636 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Gm18101-201ENSMUST00000215769 548 ntBASIC19.66■□□□□ 0.74
Prdm1Q60636 Gm21559-201ENSMUST00000220638 855 ntBASIC19.66■□□□□ 0.74
Prdm1Q60636 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Gm8587-201ENSMUST00000076538 843 ntBASIC19.66■□□□□ 0.74
Prdm1Q60636 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Prdm1Q60636 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.66■□□□□ 0.74
Prdm1Q60636 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Phf7-203ENSMUST00000226565 1971 ntBASIC19.66■□□□□ 0.74
Prdm1Q60636 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm1Q60636 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Prdm1Q60636 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Prdm1Q60636 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Prdm1Q60636 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.65■□□□□ 0.74
Prdm1Q60636 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms