Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Gm12527-201ENSMUST00000117967 564 ntBASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-3Q5R1E6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-3Q5R1E6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-3Q5R1E6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Gm27000-201ENSMUST00000182943 842 ntBASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-3Q5R1E6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms