Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.27■□□□□ 0.19
Col27a1Q5QNQ9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col27a1Q5QNQ9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Fst-202ENSMUST00000223640 2612 ntBASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col27a1Q5QNQ9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col27a1Q5QNQ9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Gm25406-201ENSMUST00000157599 105 ntBASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Gm9172-201ENSMUST00000212092 954 ntBASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col27a1Q5QNQ9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col27a1Q5QNQ9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Gm13616-201ENSMUST00000120600 222 ntBASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col27a1Q5QNQ9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col27a1Q5QNQ9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col27a1Q5QNQ9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col27a1Q5QNQ9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col27a1Q5QNQ9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col27a1Q5QNQ9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col27a1Q5QNQ9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.21■□□□□ 0.19
Col27a1Q5QNQ9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms