Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf20Q5DTM8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf20Q5DTM8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf20Q5DTM8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf20Q5DTM8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf20Q5DTM8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Gm5417-201ENSMUST00000079706 384 ntBASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Rnf20Q5DTM8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rnf20Q5DTM8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf20Q5DTM8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf20Q5DTM8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Gm13216-201ENSMUST00000117145 591 ntBASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Gm37055-201ENSMUST00000191866 133 ntBASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf20Q5DTM8 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.02■□□□□ 0.79
Rnf20Q5DTM8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf20Q5DTM8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms