Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Olfr129-201ENSMUST00000122318 993 ntBASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Gm27357-201ENSMUST00000183754 135 ntBASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Gm18669-201ENSMUST00000216049 778 ntBASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Gm15794-201ENSMUST00000120182 631 ntBASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.66■□□□□ 0.74
Prpf38aQ4FK66 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Mir3081-201ENSMUST00000175305 84 ntBASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Gm29707-201ENSMUST00000196325 491 ntBASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38aQ4FK66 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38aQ4FK66 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38aQ4FK66 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38aQ4FK66 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38aQ4FK66 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38aQ4FK66 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38aQ4FK66 Gm18421-201ENSMUST00000204122 625 ntBASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38aQ4FK66 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.63■□□□□ 0.73
Prpf38aQ4FK66 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Gm27741-201ENSMUST00000185060 237 ntBASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38aQ4FK66 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38aQ4FK66 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms