Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem40Q4FJU9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem40Q4FJU9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Gm37025-201ENSMUST00000195159 829 ntBASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem40Q4FJU9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Il3ra-202ENSMUST00000223589 738 ntBASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem40Q4FJU9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Gm11950-201ENSMUST00000121615 838 ntBASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem40Q4FJU9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tmem40Q4FJU9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.3□□□□□ -0.12
Tmem40Q4FJU9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tmem40Q4FJU9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Tmem40Q4FJU9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.3□□□□□ -0.12
Tmem40Q4FJU9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tmem40Q4FJU9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tmem40Q4FJU9 Mir3081-201ENSMUST00000175305 84 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms