Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm14822-201ENSMUST00000122247 291 ntBASIC21.02■□□□□ 0.96
Shank3Q4ACU6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shank3Q4ACU6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shank3Q4ACU6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shank3Q4ACU6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shank3Q4ACU6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Shank3Q4ACU6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Shank3Q4ACU6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.02■□□□□ 0.95
Shank3Q4ACU6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Gm2213-201ENSMUST00000197485 688 ntBASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.01■□□□□ 0.95
Shank3Q4ACU6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Iqck-206ENSMUST00000208658 2891 ntBASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Gm8097-201ENSMUST00000117903 829 ntBASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shank3Q4ACU6 Gm8784-201ENSMUST00000222096 1435 ntBASIC21■□□□□ 0.95
Shank3Q4ACU6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21■□□□□ 0.95
Shank3Q4ACU6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21■□□□□ 0.95
Shank3Q4ACU6 Gm7507-201ENSMUST00000183053 1008 ntBASIC21■□□□□ 0.95
Shank3Q4ACU6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21■□□□□ 0.95
Shank3Q4ACU6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21■□□□□ 0.95
Shank3Q4ACU6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21■□□□□ 0.95
Shank3Q4ACU6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shank3Q4ACU6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.99■□□□□ 0.95
Shank3Q4ACU6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank3Q4ACU6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Gm12497-201ENSMUST00000138778 237 ntBASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Gm10576-201ENSMUST00000191927 825 ntBASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Gm5186-201ENSMUST00000218781 920 ntBASIC20.98■□□□□ 0.95
Shank3Q4ACU6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shank3Q4ACU6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Gm4459-201ENSMUST00000118750 468 ntBASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.97■□□□□ 0.95
Shank3Q4ACU6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shank3Q4ACU6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Gm15590-201ENSMUST00000078419 552 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms