Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.21□□□□□ -0.45
Cks1brtQ3UNC9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cks1brtQ3UNC9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cks1brtQ3UNC9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Mir6538-201ENSMUST00000183713 110 ntBASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms