Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Mir770-201ENSMUST00000103252 94 ntBASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Gm8969-201ENSMUST00000199694 526 ntBASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Naf1Q3UMQ8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Naf1Q3UMQ8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Gm13186-201ENSMUST00000118031 316 ntBASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Naf1Q3UMQ8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Naf1Q3UMQ8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Phf7-203ENSMUST00000226565 1971 ntBASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.09■□□□□ 0.33
Naf1Q3UMQ8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms