Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc33Q3ULW6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc33Q3ULW6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc33Q3ULW6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc33Q3ULW6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Gm10052-201ENSMUST00000168019 960 ntBASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Gm7729-201ENSMUST00000050143 801 ntBASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc33Q3ULW6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc33Q3ULW6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Gm12895-201ENSMUST00000122214 226 ntBASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc33Q3ULW6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms