Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.53■□□□□ 0.08
Spg11Q3UHA3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Spg11Q3UHA3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Spg11Q3UHA3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Spg11Q3UHA3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Spg11Q3UHA3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Spg11Q3UHA3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Spg11Q3UHA3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Spg11Q3UHA3 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Gm25857-201ENSMUST00000082788 129 ntBASIC15.51■□□□□ 0.07
Spg11Q3UHA3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.5■□□□□ 0.07
Spg11Q3UHA3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Gm44450-201ENSMUST00000199528 114 ntBASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Spg11Q3UHA3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms