Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fndc4Q3TR08 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Gm11249-201ENSMUST00000117071 859 ntBASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Gm27275-201ENSMUST00000184318 272 ntBASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.4□□□□□ -0.1
Fndc4Q3TR08 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fndc4Q3TR08 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Gm37856-201ENSMUST00000191634 999 ntBASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Trmt13-210ENSMUST00000198454 880 ntBASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fndc4Q3TR08 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms