Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.49■□□□□ 0.39
IhhP97812 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.48■□□□□ 0.39
IhhP97812 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Gm11950-201ENSMUST00000121615 838 ntBASIC17.48■□□□□ 0.39
IhhP97812 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.48■□□□□ 0.39
IhhP97812 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.48■□□□□ 0.39
IhhP97812 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
IhhP97812 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.48■□□□□ 0.39
IhhP97812 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IhhP97812 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.47■□□□□ 0.39
IhhP97812 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.47■□□□□ 0.39
IhhP97812 Gm6623-201ENSMUST00000173570 544 ntBASIC17.47■□□□□ 0.39
IhhP97812 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.47■□□□□ 0.39
IhhP97812 Gm21362-201ENSMUST00000194272 928 ntBASIC17.47■□□□□ 0.39
IhhP97812 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.47■□□□□ 0.39
IhhP97812 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IhhP97812 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.47■□□□□ 0.39
IhhP97812 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
IhhP97812 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IhhP97812 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.46■□□□□ 0.39
IhhP97812 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IhhP97812 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.46■□□□□ 0.39
IhhP97812 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.46■□□□□ 0.39
IhhP97812 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IhhP97812 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IhhP97812 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IhhP97812 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
IhhP97812 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
IhhP97812 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
IhhP97812 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.45■□□□□ 0.38
IhhP97812 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IhhP97812 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.45■□□□□ 0.38
IhhP97812 Gm7284-201ENSMUST00000131667 944 ntBASIC17.45■□□□□ 0.38
IhhP97812 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.45■□□□□ 0.38
IhhP97812 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.45■□□□□ 0.38
IhhP97812 Gm27704-201ENSMUST00000185094 107 ntBASIC17.45■□□□□ 0.38
IhhP97812 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IhhP97812 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IhhP97812 Gm10819-201ENSMUST00000099988 561 ntBASIC17.45■□□□□ 0.38
IhhP97812 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IhhP97812 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IhhP97812 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IhhP97812 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IhhP97812 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IhhP97812 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IhhP97812 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IhhP97812 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.44■□□□□ 0.38
IhhP97812 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
IhhP97812 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IhhP97812 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms