Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC11.55□□□□□ -0.56
PrkdcP97313 Gm12428-201ENSMUST00000119844 727 ntBASIC11.55□□□□□ -0.56
PrkdcP97313 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Mir7023-201ENSMUST00000185093 64 ntBASIC11.55□□□□□ -0.56
PrkdcP97313 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.55□□□□□ -0.56
PrkdcP97313 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Gm14127-201ENSMUST00000117906 678 ntBASIC11.55□□□□□ -0.56
PrkdcP97313 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.55□□□□□ -0.56
PrkdcP97313 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.55□□□□□ -0.56
PrkdcP97313 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.55□□□□□ -0.56
PrkdcP97313 Grk6-206ENSMUST00000224995 2971 ntBASIC11.55□□□□□ -0.56
PrkdcP97313 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
PrkdcP97313 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC11.55□□□□□ -0.56
PrkdcP97313 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
PrkdcP97313 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Gm5312-201ENSMUST00000203728 547 ntBASIC11.54□□□□□ -0.56
PrkdcP97313 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PrkdcP97313 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.54□□□□□ -0.56
PrkdcP97313 Gm35558-201ENSMUST00000222675 2219 ntBASIC11.54□□□□□ -0.56
PrkdcP97313 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.54□□□□□ -0.56
PrkdcP97313 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PrkdcP97313 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.54□□□□□ -0.56
PrkdcP97313 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.54□□□□□ -0.56
PrkdcP97313 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PrkdcP97313 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.53□□□□□ -0.56
PrkdcP97313 BC021767-201ENSMUST00000126387 1716 ntBASIC11.53□□□□□ -0.56
PrkdcP97313 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.53□□□□□ -0.56
PrkdcP97313 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.53□□□□□ -0.56
PrkdcP97313 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.53□□□□□ -0.56
PrkdcP97313 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Gm12497-201ENSMUST00000138778 237 ntBASIC11.53□□□□□ -0.56
PrkdcP97313 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.53□□□□□ -0.56
PrkdcP97313 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.53□□□□□ -0.56
PrkdcP97313 Gm5784-201ENSMUST00000179344 2478 ntBASIC11.53□□□□□ -0.56
PrkdcP97313 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PrkdcP97313 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.52□□□□□ -0.56
PrkdcP97313 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
PrkdcP97313 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
PrkdcP97313 Gm27646-201ENSMUST00000183989 110 ntBASIC11.52□□□□□ -0.56
PrkdcP97313 Gm44492-201ENSMUST00000197012 141 ntBASIC11.52□□□□□ -0.56
PrkdcP97313 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PrkdcP97313 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PrkdcP97313 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Gm27494-201ENSMUST00000184735 189 ntBASIC11.52□□□□□ -0.57
PrkdcP97313 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
PrkdcP97313 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
PrkdcP97313 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PrkdcP97313 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PrkdcP97313 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PrkdcP97313 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms