Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CiitaP79621 Gm6623-201ENSMUST00000173570 544 ntBASIC18.3■□□□□ 0.52
CiitaP79621 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CiitaP79621 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CiitaP79621 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.29■□□□□ 0.52
CiitaP79621 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CiitaP79621 Ank2-226ENSMUST00000189368 339 ntBASIC18.29■□□□□ 0.52
CiitaP79621 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CiitaP79621 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CiitaP79621 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CiitaP79621 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.28■□□□□ 0.52
CiitaP79621 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CiitaP79621 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CiitaP79621 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.28■□□□□ 0.52
CiitaP79621 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.28■□□□□ 0.52
CiitaP79621 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.28■□□□□ 0.52
CiitaP79621 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.28■□□□□ 0.52
CiitaP79621 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.28■□□□□ 0.52
CiitaP79621 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CiitaP79621 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.27■□□□□ 0.52
CiitaP79621 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CiitaP79621 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 Gm14859-201ENSMUST00000117752 357 ntBASIC18.27■□□□□ 0.52
CiitaP79621 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.27■□□□□ 0.52
CiitaP79621 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CiitaP79621 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CiitaP79621 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CiitaP79621 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CiitaP79621 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CiitaP79621 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.27■□□□□ 0.51
CiitaP79621 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CiitaP79621 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.26■□□□□ 0.51
CiitaP79621 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.26■□□□□ 0.51
CiitaP79621 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CiitaP79621 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.26■□□□□ 0.51
CiitaP79621 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.26■□□□□ 0.51
CiitaP79621 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.26■□□□□ 0.51
CiitaP79621 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CiitaP79621 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CiitaP79621 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Gm45328-201ENSMUST00000210942 917 ntBASIC18.25■□□□□ 0.51
CiitaP79621 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CiitaP79621 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms