Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgb1P63158 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgb1P63158 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgb1P63158 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmgb1P63158 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgb1P63158 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgb1P63158 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgb1P63158 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
Hmgb1P63158 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Gm38027-201ENSMUST00000192315 235 ntBASIC18.52■□□□□ 0.56
Hmgb1P63158 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.52■□□□□ 0.56
Hmgb1P63158 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgb1P63158 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgb1P63158 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgb1P63158 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Hmgb1P63158 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.52■□□□□ 0.55
Hmgb1P63158 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgb1P63158 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hmgb1P63158 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hmgb1P63158 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.51■□□□□ 0.55
Hmgb1P63158 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Gm12085-201ENSMUST00000119263 940 ntBASIC18.51■□□□□ 0.55
Hmgb1P63158 Gm7638-201ENSMUST00000121348 967 ntBASIC18.51■□□□□ 0.55
Hmgb1P63158 Il3ra-202ENSMUST00000223589 738 ntBASIC18.51■□□□□ 0.55
Hmgb1P63158 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.51■□□□□ 0.55
Hmgb1P63158 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgb1P63158 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Gm10653-202ENSMUST00000139570 835 ntBASIC18.5■□□□□ 0.55
Hmgb1P63158 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hmgb1P63158 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgb1P63158 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Hmgb1P63158 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hmgb1P63158 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmgb1P63158 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.49■□□□□ 0.55
Hmgb1P63158 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmgb1P63158 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmgb1P63158 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.49■□□□□ 0.55
Hmgb1P63158 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgb1P63158 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.48■□□□□ 0.55
Hmgb1P63158 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgb1P63158 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.48■□□□□ 0.55
Hmgb1P63158 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hmgb1P63158 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms