Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Vps33bP59016 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps33bP59016 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC21.32■■□□□ 1
Vps33bP59016 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.32■■□□□ 1
Vps33bP59016 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33bP59016 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33bP59016 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.32■■□□□ 1
Vps33bP59016 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps33bP59016 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.32■■□□□ 1
Vps33bP59016 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vps33bP59016 Gm10175-201ENSMUST00000086013 645 ntBASIC21.31■■□□□ 1
Vps33bP59016 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33bP59016 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC21.3■■□□□ 1
Vps33bP59016 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC21.3■■□□□ 1
Vps33bP59016 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Vps33bP59016 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Vps33bP59016 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vps33bP59016 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33bP59016 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.29■■□□□ 1
Vps33bP59016 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Gm15920-201ENSMUST00000118998 402 ntBASIC21.29■■□□□ 1
Vps33bP59016 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Gm25911-201ENSMUST00000157621 56 ntBASIC21.29■■□□□ 1
Vps33bP59016 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Vps33bP59016 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.29■■□□□ 1
Vps33bP59016 AC151286.1-201ENSMUST00000198489 145 ntBASIC21.29■■□□□ 1
Vps33bP59016 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.29■■□□□ 1
Vps33bP59016 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.29■■□□□ 1
Vps33bP59016 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC21.29■■□□□ 1
Vps33bP59016 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps33bP59016 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33bP59016 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.28■■□□□ 1
Vps33bP59016 Gm26308-201ENSMUST00000157768 69 ntBASIC21.28■■□□□ 1
Vps33bP59016 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Vps33bP59016 Gm10576-201ENSMUST00000191927 825 ntBASIC21.28■■□□□ 1
Vps33bP59016 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC21.28■■□□□ 1
Vps33bP59016 Gm8655-201ENSMUST00000221159 852 ntBASIC21.28■■□□□ 1
Vps33bP59016 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33bP59016 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps33bP59016 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33bP59016 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps33bP59016 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33bP59016 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Vps33bP59016 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps33bP59016 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps33bP59016 Gm7222-201ENSMUST00000117512 906 ntBASIC21.27■■□□□ 1
Vps33bP59016 Gm8097-201ENSMUST00000117903 829 ntBASIC21.27■■□□□ 1
Vps33bP59016 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.27■■□□□ 1
Vps33bP59016 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vps33bP59016 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps33bP59016 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps33bP59016 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.26■□□□□ 0.99
Vps33bP59016 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vps33bP59016 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33bP59016 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33bP59016 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Vps33bP59016 Gm4459-201ENSMUST00000118750 468 ntBASIC21.26■□□□□ 0.99
Vps33bP59016 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC21.26■□□□□ 0.99
Vps33bP59016 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33bP59016 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.26■□□□□ 0.99
Vps33bP59016 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vps33bP59016 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33bP59016 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33bP59016 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33bP59016 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Vps33bP59016 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33bP59016 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms