Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.93■□□□□ 0.62
Brca1P48754 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.93■□□□□ 0.62
Brca1P48754 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Brca1P48754 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Brca1P48754 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.93■□□□□ 0.62
Brca1P48754 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Brca1P48754 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.93■□□□□ 0.62
Brca1P48754 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca1P48754 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.92■□□□□ 0.62
Brca1P48754 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Brca1P48754 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca1P48754 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca1P48754 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Brca1P48754 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca1P48754 Gm9727-201ENSMUST00000161387 555 ntBASIC18.92■□□□□ 0.62
Brca1P48754 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.92■□□□□ 0.62
Brca1P48754 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca1P48754 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca1P48754 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Brca1P48754 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.91■□□□□ 0.62
Brca1P48754 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Brca1P48754 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.91■□□□□ 0.62
Brca1P48754 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Brca1P48754 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Brca1P48754 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca1P48754 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.9■□□□□ 0.62
Brca1P48754 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.9■□□□□ 0.62
Brca1P48754 Gm6550-201ENSMUST00000187574 993 ntBASIC18.9■□□□□ 0.62
Brca1P48754 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Brca1P48754 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Brca1P48754 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.9■□□□□ 0.62
Brca1P48754 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.9■□□□□ 0.62
Brca1P48754 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Gm8969-201ENSMUST00000199694 526 ntBASIC18.9■□□□□ 0.62
Brca1P48754 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Brca1P48754 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.89■□□□□ 0.62
Brca1P48754 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Brca1P48754 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.89■□□□□ 0.62
Brca1P48754 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Brca1P48754 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Brca1P48754 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Gm4535-201ENSMUST00000182274 558 ntBASIC18.89■□□□□ 0.61
Brca1P48754 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.89■□□□□ 0.61
Brca1P48754 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Gm10355-201ENSMUST00000097146 517 ntBASIC18.89■□□□□ 0.61
Brca1P48754 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Brca1P48754 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Brca1P48754 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Brca1P48754 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Brca1P48754 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.88■□□□□ 0.61
Brca1P48754 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.88■□□□□ 0.61
Brca1P48754 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.88■□□□□ 0.61
Brca1P48754 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.88■□□□□ 0.61
Brca1P48754 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Gm7506-201ENSMUST00000207758 815 ntBASIC18.88■□□□□ 0.61
Brca1P48754 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.88■□□□□ 0.61
Brca1P48754 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Brca1P48754 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Brca1P48754 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.88■□□□□ 0.61
Brca1P48754 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.88■□□□□ 0.61
Brca1P48754 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.88■□□□□ 0.61
Brca1P48754 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms