Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.98■□□□□ 0.15
Cdx2P43241 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Cdx2P43241 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cdx2P43241 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cdx2P43241 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.98■□□□□ 0.15
Cdx2P43241 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.98■□□□□ 0.15
Cdx2P43241 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdx2P43241 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cdx2P43241 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cdx2P43241 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.97■□□□□ 0.15
Cdx2P43241 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.97■□□□□ 0.15
Cdx2P43241 Gm15165-201ENSMUST00000118140 502 ntBASIC15.97■□□□□ 0.15
Cdx2P43241 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Gm7862-201ENSMUST00000121461 292 ntBASIC15.97■□□□□ 0.15
Cdx2P43241 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Cdx2P43241 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.97■□□□□ 0.15
Cdx2P43241 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.97■□□□□ 0.15
Cdx2P43241 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cdx2P43241 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cdx2P43241 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.97■□□□□ 0.15
Cdx2P43241 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx2P43241 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdx2P43241 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.96■□□□□ 0.15
Cdx2P43241 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdx2P43241 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx2P43241 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdx2P43241 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.95■□□□□ 0.14
Cdx2P43241 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cdx2P43241 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cdx2P43241 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cdx2P43241 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Gm44454-201ENSMUST00000198541 138 ntBASIC15.95■□□□□ 0.14
Cdx2P43241 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.95■□□□□ 0.14
Cdx2P43241 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.95■□□□□ 0.14
Cdx2P43241 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdx2P43241 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdx2P43241 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.95■□□□□ 0.14
Cdx2P43241 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.95■□□□□ 0.14
Cdx2P43241 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx2P43241 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx2P43241 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx2P43241 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx2P43241 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx2P43241 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdx2P43241 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.94■□□□□ 0.14
Cdx2P43241 Mir5131-201ENSMUST00000175426 93 ntBASIC15.94■□□□□ 0.14
Cdx2P43241 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.94■□□□□ 0.14
Cdx2P43241 Gm37935-201ENSMUST00000192012 982 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms