Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Mir2861-201ENSMUST00000175539 82 ntBASIC17■□□□□ 0.31
Fen1P39749 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17■□□□□ 0.31
Fen1P39749 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17■□□□□ 0.31
Fen1P39749 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17■□□□□ 0.31
Fen1P39749 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Fen1P39749 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Fen1P39749 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Fen1P39749 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Mir5133-201ENSMUST00000174955 77 ntBASIC16.99■□□□□ 0.31
Fen1P39749 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.99■□□□□ 0.31
Fen1P39749 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Fen1P39749 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Fen1P39749 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Fen1P39749 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Gm7290-201ENSMUST00000104990 617 ntBASIC16.98■□□□□ 0.31
Fen1P39749 Gm12918-201ENSMUST00000120234 636 ntBASIC16.98■□□□□ 0.31
Fen1P39749 Gm15710-201ENSMUST00000121821 636 ntBASIC16.98■□□□□ 0.31
Fen1P39749 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.98■□□□□ 0.31
Fen1P39749 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Gm5075-201ENSMUST00000196916 622 ntBASIC16.98■□□□□ 0.31
Fen1P39749 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.98■□□□□ 0.31
Fen1P39749 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.98■□□□□ 0.31
Fen1P39749 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.98■□□□□ 0.31
Fen1P39749 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Fen1P39749 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Fen1P39749 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Fen1P39749 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Fen1P39749 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Fen1P39749 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Fen1P39749 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Fen1P39749 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Fen1P39749 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.97■□□□□ 0.31
Fen1P39749 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Fen1P39749 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.97■□□□□ 0.31
Fen1P39749 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Fen1P39749 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Fen1P39749 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Fen1P39749 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Fen1P39749 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
Fen1P39749 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.96■□□□□ 0.31
Fen1P39749 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.96■□□□□ 0.31
Fen1P39749 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Mtag2-201ENSMUST00000058665 714 ntBASIC16.96■□□□□ 0.31
Fen1P39749 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Fen1P39749 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Fen1P39749 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms