Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc6a1P31648 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.54□□□□□ -0.08
Slc6a1P31648 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Slc6a1P31648 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Slc6a1P31648 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.53□□□□□ -0.08
Slc6a1P31648 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.53□□□□□ -0.08
Slc6a1P31648 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.53□□□□□ -0.08
Slc6a1P31648 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.53□□□□□ -0.08
Slc6a1P31648 Gm12441-201ENSMUST00000121806 588 ntBASIC14.53□□□□□ -0.08
Slc6a1P31648 Gm6365-201ENSMUST00000054711 744 ntBASIC14.53□□□□□ -0.08
Slc6a1P31648 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc6a1P31648 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a1P31648 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a1P31648 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a1P31648 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a1P31648 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a1P31648 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc6a1P31648 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Slc6a1P31648 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a1P31648 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a1P31648 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a1P31648 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc6a1P31648 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Slc6a1P31648 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.52□□□□□ -0.09
Slc6a1P31648 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.52□□□□□ -0.09
Slc6a1P31648 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Slc6a1P31648 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Slc6a1P31648 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.51□□□□□ -0.09
Slc6a1P31648 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Slc6a1P31648 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc6a1P31648 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Slc6a1P31648 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.5□□□□□ -0.09
Slc6a1P31648 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Slc6a1P31648 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Slc6a1P31648 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.5□□□□□ -0.09
Slc6a1P31648 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Gm6211-202ENSMUST00000167849 925 ntBASIC14.5□□□□□ -0.09
Slc6a1P31648 Gm6420-201ENSMUST00000193885 723 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms