Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.37■□□□□ 0.69
Vcam1P29533 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.37■□□□□ 0.69
Vcam1P29533 Gm43347-201ENSMUST00000200226 580 ntBASIC19.37■□□□□ 0.69
Vcam1P29533 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.37■□□□□ 0.69
Vcam1P29533 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vcam1P29533 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Vcam1P29533 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.36■□□□□ 0.69
Vcam1P29533 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.36■□□□□ 0.69
Vcam1P29533 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vcam1P29533 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vcam1P29533 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vcam1P29533 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Gm10052-201ENSMUST00000168019 960 ntBASIC19.35■□□□□ 0.69
Vcam1P29533 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vcam1P29533 Gm7729-201ENSMUST00000050143 801 ntBASIC19.35■□□□□ 0.69
Vcam1P29533 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vcam1P29533 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.35■□□□□ 0.69
Vcam1P29533 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vcam1P29533 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.34■□□□□ 0.69
Vcam1P29533 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.34■□□□□ 0.69
Vcam1P29533 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Vcam1P29533 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Vcam1P29533 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Gm44430-201ENSMUST00000203376 995 ntBASIC19.34■□□□□ 0.69
Vcam1P29533 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Mzt1-203ENSMUST00000227948 952 ntBASIC19.34■□□□□ 0.69
Vcam1P29533 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.34■□□□□ 0.69
Vcam1P29533 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vcam1P29533 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Vcam1P29533 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vcam1P29533 Gm13884-201ENSMUST00000118103 829 ntBASIC19.33■□□□□ 0.68
Vcam1P29533 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.33■□□□□ 0.68
Vcam1P29533 Gm5864-201ENSMUST00000202263 970 ntBASIC19.33■□□□□ 0.68
Vcam1P29533 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.33■□□□□ 0.68
Vcam1P29533 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vcam1P29533 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vcam1P29533 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vcam1P29533 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vcam1P29533 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vcam1P29533 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Vcam1P29533 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Vcam1P29533 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Vcam1P29533 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Vcam1P29533 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms