Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.64■□□□□ 0.57
RarbP22605 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RarbP22605 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RarbP22605 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RarbP22605 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RarbP22605 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RarbP22605 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RarbP22605 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.63■□□□□ 0.57
RarbP22605 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.63■□□□□ 0.57
RarbP22605 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.63■□□□□ 0.57
RarbP22605 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RarbP22605 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RarbP22605 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
RarbP22605 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.63■□□□□ 0.57
RarbP22605 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RarbP22605 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RarbP22605 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RarbP22605 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.62■□□□□ 0.57
RarbP22605 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.62■□□□□ 0.57
RarbP22605 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.62■□□□□ 0.57
RarbP22605 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RarbP22605 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.62■□□□□ 0.57
RarbP22605 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RarbP22605 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RarbP22605 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RarbP22605 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RarbP22605 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Gm12644-201ENSMUST00000119935 606 ntBASIC18.61■□□□□ 0.57
RarbP22605 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.61■□□□□ 0.57
RarbP22605 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RarbP22605 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.61■□□□□ 0.57
RarbP22605 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RarbP22605 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
RarbP22605 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.6■□□□□ 0.57
RarbP22605 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.6■□□□□ 0.57
RarbP22605 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.6■□□□□ 0.57
RarbP22605 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.6■□□□□ 0.57
RarbP22605 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.6■□□□□ 0.57
RarbP22605 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.6■□□□□ 0.57
RarbP22605 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.6■□□□□ 0.57
RarbP22605 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.6■□□□□ 0.57
RarbP22605 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RarbP22605 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RarbP22605 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RarbP22605 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RarbP22605 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RarbP22605 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RarbP22605 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RarbP22605 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.59■□□□□ 0.57
RarbP22605 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Gm25925-201ENSMUST00000158314 306 ntBASIC18.59■□□□□ 0.57
RarbP22605 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.59■□□□□ 0.57
RarbP22605 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.59■□□□□ 0.57
RarbP22605 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RarbP22605 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RarbP22605 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RarbP22605 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms