Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm8587-201ENSMUST00000076538 843 ntBASIC15.03■□□□□ -0
P06344 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
P06344 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
P06344 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06344 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.03■□□□□ -0
P06344 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.03■□□□□ -0
P06344 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06344 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.03■□□□□ -0
P06344 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.02■□□□□ -0
P06344 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
P06344 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
P06344 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.02■□□□□ -0
P06344 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
P06344 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.02■□□□□ -0
P06344 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.02■□□□□ -0
P06344 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.02■□□□□ -0
P06344 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06344 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
P06344 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
P06344 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
P06344 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P06344 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P06344 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.02□□□□□ -0.01
P06344 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
P06344 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.02□□□□□ -0.01
P06344 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
P06344 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P06344 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
P06344 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.01□□□□□ -0.01
P06344 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.01□□□□□ -0.01
P06344 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
P06344 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
P06344 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
P06344 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
P06344 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.01□□□□□ -0.01
P06344 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06344 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
P06344 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
P06344 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
P06344 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
P06344 AA414768-201ENSMUST00000121924 1257 ntBASIC15□□□□□ -0.01
P06344 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
P06344 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
P06344 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Gm27000-201ENSMUST00000182943 842 ntBASIC15□□□□□ -0.01
P06344 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15□□□□□ -0.01
P06344 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06344 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15□□□□□ -0.01
P06344 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.99□□□□□ -0.01
P06344 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
P06344 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
P06344 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.99□□□□□ -0.01
P06344 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms