Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.14□□□□□ -0.15
Hoxa3P02831 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hoxa3P02831 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.14□□□□□ -0.15
Hoxa3P02831 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxa3P02831 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hoxa3P02831 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 AA414768-201ENSMUST00000121924 1257 ntBASIC14.13□□□□□ -0.15
Hoxa3P02831 Gm13474-201ENSMUST00000122466 815 ntBASIC14.13□□□□□ -0.15
Hoxa3P02831 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hoxa3P02831 Gm21362-201ENSMUST00000194272 928 ntBASIC14.13□□□□□ -0.15
Hoxa3P02831 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Hoxa3P02831 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Hoxa3P02831 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxa3P02831 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxa3P02831 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.12□□□□□ -0.15
Hoxa3P02831 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxa3P02831 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.12□□□□□ -0.15
Hoxa3P02831 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxa3P02831 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxa3P02831 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxa3P02831 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.12□□□□□ -0.15
Hoxa3P02831 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Gm10819-201ENSMUST00000099988 561 ntBASIC14.12□□□□□ -0.15
Hoxa3P02831 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hoxa3P02831 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxa3P02831 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa3P02831 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.11□□□□□ -0.15
Hoxa3P02831 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxa3P02831 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa3P02831 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.11□□□□□ -0.15
Hoxa3P02831 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.11□□□□□ -0.15
Hoxa3P02831 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hoxa3P02831 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.11□□□□□ -0.15
Hoxa3P02831 Gm8969-201ENSMUST00000199694 526 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms