Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01788 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01788 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01788 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01788 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01788 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01788 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01788 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.36□□□□□ -0.27
P01788 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P01788 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P01788 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Gm11249-201ENSMUST00000117071 859 ntBASIC13.36□□□□□ -0.27
P01788 Gm12896-201ENSMUST00000118430 226 ntBASIC13.36□□□□□ -0.27
P01788 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.36□□□□□ -0.27
P01788 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P01788 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.36□□□□□ -0.27
P01788 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.36□□□□□ -0.27
P01788 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
P01788 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.36□□□□□ -0.27
P01788 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P01788 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01788 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
P01788 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P01788 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P01788 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
P01788 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.35□□□□□ -0.27
P01788 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P01788 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P01788 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P01788 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01788 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
P01788 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.34□□□□□ -0.27
P01788 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.34□□□□□ -0.27
P01788 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.34□□□□□ -0.27
P01788 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.34□□□□□ -0.27
P01788 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.34□□□□□ -0.27
P01788 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
P01788 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01788 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
P01788 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
P01788 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
P01788 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.33□□□□□ -0.28
P01788 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P01788 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.33□□□□□ -0.28
P01788 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.33□□□□□ -0.28
P01788 Gm37179-201ENSMUST00000194862 823 ntBASIC13.33□□□□□ -0.28
P01788 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.33□□□□□ -0.28
P01788 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.33□□□□□ -0.28
P01788 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P01788 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms