Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sp1O89090 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sp1O89090 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.05■□□□□ 0.32
Sp1O89090 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.05■□□□□ 0.32
Sp1O89090 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sp1O89090 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.04■□□□□ 0.32
Sp1O89090 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.04■□□□□ 0.32
Sp1O89090 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.04■□□□□ 0.32
Sp1O89090 Gm18421-201ENSMUST00000204122 625 ntBASIC17.04■□□□□ 0.32
Sp1O89090 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sp1O89090 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sp1O89090 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.03■□□□□ 0.32
Sp1O89090 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sp1O89090 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.03■□□□□ 0.32
Sp1O89090 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.03■□□□□ 0.32
Sp1O89090 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.03■□□□□ 0.32
Sp1O89090 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sp1O89090 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sp1O89090 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.03■□□□□ 0.32
Sp1O89090 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sp1O89090 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Sp1O89090 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.02■□□□□ 0.32
Sp1O89090 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp1O89090 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp1O89090 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp1O89090 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp1O89090 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.02■□□□□ 0.32
Sp1O89090 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.02■□□□□ 0.32
Sp1O89090 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.02■□□□□ 0.32
Sp1O89090 Gm27742-201ENSMUST00000184667 60 ntBASIC17.02■□□□□ 0.32
Sp1O89090 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.02■□□□□ 0.32
Sp1O89090 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sp1O89090 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sp1O89090 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sp1O89090 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp1O89090 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp1O89090 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp1O89090 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sp1O89090 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Sp1O89090 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sp1O89090 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sp1O89090 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sp1O89090 Gm29707-201ENSMUST00000196325 491 ntBASIC17.01■□□□□ 0.31
Sp1O89090 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.01■□□□□ 0.31
Sp1O89090 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.01■□□□□ 0.31
Sp1O89090 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.01■□□□□ 0.31
Sp1O89090 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.01■□□□□ 0.31
Sp1O89090 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sp1O89090 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sp1O89090 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Sp1O89090 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17■□□□□ 0.31
Sp1O89090 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Gm9103-201ENSMUST00000119371 405 ntBASIC17■□□□□ 0.31
Sp1O89090 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 AC107711.5-202ENSMUST00000226429 702 ntBASIC17■□□□□ 0.31
Sp1O89090 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sp1O89090 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sp1O89090 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sp1O89090 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sp1O89090 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sp1O89090 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sp1O89090 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sp1O89090 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sp1O89090 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sp1O89090 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.99■□□□□ 0.31
Sp1O89090 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms