Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Best1O88870 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Best1O88870 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Best1O88870 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Best1O88870 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.21■□□□□ 0.19
Best1O88870 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Best1O88870 Gm27357-201ENSMUST00000183754 135 ntBASIC16.21■□□□□ 0.19
Best1O88870 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.21■□□□□ 0.19
Best1O88870 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Best1O88870 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Best1O88870 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Best1O88870 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Best1O88870 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Best1O88870 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Gm9103-201ENSMUST00000119371 405 ntBASIC16.2■□□□□ 0.18
Best1O88870 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.2■□□□□ 0.18
Best1O88870 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.2■□□□□ 0.18
Best1O88870 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.2■□□□□ 0.18
Best1O88870 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.2■□□□□ 0.18
Best1O88870 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.2■□□□□ 0.18
Best1O88870 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.2■□□□□ 0.18
Best1O88870 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Best1O88870 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Best1O88870 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Gm15794-201ENSMUST00000120182 631 ntBASIC16.19■□□□□ 0.18
Best1O88870 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Gm17807-201ENSMUST00000186869 298 ntBASIC16.19■□□□□ 0.18
Best1O88870 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Best1O88870 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Best1O88870 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.18■□□□□ 0.18
Best1O88870 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Best1O88870 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Best1O88870 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.18■□□□□ 0.18
Best1O88870 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Best1O88870 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Best1O88870 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.18■□□□□ 0.18
Best1O88870 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Best1O88870 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.18■□□□□ 0.18
Best1O88870 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Best1O88870 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.17■□□□□ 0.18
Best1O88870 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.17■□□□□ 0.18
Best1O88870 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.17■□□□□ 0.18
Best1O88870 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.17■□□□□ 0.18
Best1O88870 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.17■□□□□ 0.18
Best1O88870 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms