Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.17■□□□□ 0.18
Hcn3O88705 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hcn3O88705 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.17■□□□□ 0.18
Hcn3O88705 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.17■□□□□ 0.18
Hcn3O88705 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hcn3O88705 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcn3O88705 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.16■□□□□ 0.18
Hcn3O88705 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.16■□□□□ 0.18
Hcn3O88705 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.16■□□□□ 0.18
Hcn3O88705 Gm4968-201ENSMUST00000071458 858 ntBASIC16.16■□□□□ 0.18
Hcn3O88705 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hcn3O88705 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn3O88705 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.15■□□□□ 0.18
Hcn3O88705 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hcn3O88705 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.15■□□□□ 0.18
Hcn3O88705 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.15■□□□□ 0.18
Hcn3O88705 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hcn3O88705 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
Hcn3O88705 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hcn3O88705 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.15■□□□□ 0.18
Hcn3O88705 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn3O88705 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hcn3O88705 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.14■□□□□ 0.17
Hcn3O88705 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hcn3O88705 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.14■□□□□ 0.17
Hcn3O88705 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.14■□□□□ 0.17
Hcn3O88705 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.14■□□□□ 0.17
Hcn3O88705 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.14■□□□□ 0.17
Hcn3O88705 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hcn3O88705 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hcn3O88705 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Hcn3O88705 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hcn3O88705 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hcn3O88705 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn3O88705 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.13■□□□□ 0.17
Hcn3O88705 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hcn3O88705 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hcn3O88705 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.13■□□□□ 0.17
Hcn3O88705 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.13■□□□□ 0.17
Hcn3O88705 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms