Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim3O70209 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pdlim3O70209 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.31■□□□□ 0.04
Pdlim3O70209 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim3O70209 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Pdlim3O70209 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pdlim3O70209 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pdlim3O70209 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Pdlim3O70209 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim3O70209 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pdlim3O70209 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Pdlim3O70209 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pdlim3O70209 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.3■□□□□ 0.04
Pdlim3O70209 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.3■□□□□ 0.04
Pdlim3O70209 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdlim3O70209 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pdlim3O70209 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdlim3O70209 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Dio3-201ENSMUST00000097228 1449 ntBASIC15.29■□□□□ 0.04
Pdlim3O70209 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.29■□□□□ 0.04
Pdlim3O70209 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.29■□□□□ 0.04
Pdlim3O70209 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdlim3O70209 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pdlim3O70209 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdlim3O70209 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdlim3O70209 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdlim3O70209 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.28■□□□□ 0.04
Pdlim3O70209 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.28■□□□□ 0.04
Pdlim3O70209 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.28■□□□□ 0.04
Pdlim3O70209 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.28■□□□□ 0.04
Pdlim3O70209 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms