Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Smarce1O54941 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.06■□□□□ 0.8
Smarce1O54941 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Smarce1O54941 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarce1O54941 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.05■□□□□ 0.8
Smarce1O54941 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 Trmt13-210ENSMUST00000198454 880 ntBASIC20.05■□□□□ 0.8
Smarce1O54941 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Smarce1O54941 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarce1O54941 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarce1O54941 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Smarce1O54941 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smarce1O54941 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarce1O54941 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smarce1O54941 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.04■□□□□ 0.8
Smarce1O54941 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.03■□□□□ 0.8
Smarce1O54941 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.03■□□□□ 0.8
Smarce1O54941 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smarce1O54941 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smarce1O54941 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarce1O54941 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smarce1O54941 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Smarce1O54941 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smarce1O54941 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Smarce1O54941 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Smarce1O54941 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.02■□□□□ 0.8
Smarce1O54941 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.02■□□□□ 0.8
Smarce1O54941 Gm37856-201ENSMUST00000191634 999 ntBASIC20.02■□□□□ 0.8
Smarce1O54941 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarce1O54941 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarce1O54941 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Smarce1O54941 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarce1O54941 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarce1O54941 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smarce1O54941 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.01■□□□□ 0.79
Smarce1O54941 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smarce1O54941 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smarce1O54941 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smarce1O54941 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms