Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Limk2O54785 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.1■□□□□ 0.33
Limk2O54785 Ank2-226ENSMUST00000189368 339 ntBASIC17.1■□□□□ 0.33
Limk2O54785 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Limk2O54785 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Limk2O54785 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
Limk2O54785 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Limk2O54785 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limk2O54785 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.09■□□□□ 0.33
Limk2O54785 Gm7370-201ENSMUST00000219471 767 ntBASIC17.09■□□□□ 0.33
Limk2O54785 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.09■□□□□ 0.33
Limk2O54785 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Limk2O54785 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Limk2O54785 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.09■□□□□ 0.33
Limk2O54785 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Limk2O54785 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Limk2O54785 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Limk2O54785 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Limk2O54785 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Gm13474-201ENSMUST00000122466 815 ntBASIC17.08■□□□□ 0.32
Limk2O54785 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.08■□□□□ 0.32
Limk2O54785 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Limk2O54785 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Limk2O54785 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Limk2O54785 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.07■□□□□ 0.32
Limk2O54785 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.07■□□□□ 0.32
Limk2O54785 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.07■□□□□ 0.32
Limk2O54785 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.07■□□□□ 0.32
Limk2O54785 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.07■□□□□ 0.32
Limk2O54785 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Limk2O54785 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.07■□□□□ 0.32
Limk2O54785 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Limk2O54785 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Limk2O54785 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Limk2O54785 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Limk2O54785 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.06■□□□□ 0.32
Limk2O54785 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.06■□□□□ 0.32
Limk2O54785 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Limk2O54785 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Limk2O54785 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Limk2O54785 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms