Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clk2O35491 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.35■□□□□ 0.53
Clk2O35491 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clk2O35491 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clk2O35491 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clk2O35491 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.35■□□□□ 0.53
Clk2O35491 Gm29707-201ENSMUST00000196325 491 ntBASIC18.35■□□□□ 0.53
Clk2O35491 Gm18421-201ENSMUST00000204122 625 ntBASIC18.35■□□□□ 0.53
Clk2O35491 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.35■□□□□ 0.53
Clk2O35491 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.35■□□□□ 0.53
Clk2O35491 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clk2O35491 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk2O35491 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.34■□□□□ 0.53
Clk2O35491 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clk2O35491 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk2O35491 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Clk2O35491 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Clk2O35491 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk2O35491 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Clk2O35491 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Gm15794-201ENSMUST00000120182 631 ntBASIC18.33■□□□□ 0.52
Clk2O35491 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Gm27357-201ENSMUST00000183754 135 ntBASIC18.33■□□□□ 0.52
Clk2O35491 Gm17807-201ENSMUST00000186869 298 ntBASIC18.33■□□□□ 0.52
Clk2O35491 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.33■□□□□ 0.52
Clk2O35491 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.33■□□□□ 0.52
Clk2O35491 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Clk2O35491 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clk2O35491 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Olfr129-201ENSMUST00000122318 993 ntBASIC18.32■□□□□ 0.52
Clk2O35491 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.32■□□□□ 0.52
Clk2O35491 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.32■□□□□ 0.52
Clk2O35491 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Clk2O35491 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Clk2O35491 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk2O35491 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clk2O35491 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.31■□□□□ 0.52
Clk2O35491 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk2O35491 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk2O35491 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Clk2O35491 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.31■□□□□ 0.52
Clk2O35491 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Clk2O35491 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.31■□□□□ 0.52
Clk2O35491 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.31■□□□□ 0.52
Clk2O35491 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Clk2O35491 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clk2O35491 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk2O35491 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clk2O35491 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk2O35491 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk2O35491 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.3■□□□□ 0.52
Clk2O35491 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms