Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
Clcn6O35454 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18■□□□□ 0.47
Clcn6O35454 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Gm6681-201ENSMUST00000205215 607 ntBASIC18■□□□□ 0.47
Clcn6O35454 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC18■□□□□ 0.47
Clcn6O35454 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Rab3c-203ENSMUST00000224180 967 ntBASIC18■□□□□ 0.47
Clcn6O35454 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18■□□□□ 0.47
Clcn6O35454 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn6O35454 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn6O35454 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Gm12752-201ENSMUST00000121657 811 ntBASIC17.99■□□□□ 0.47
Clcn6O35454 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Clcn6O35454 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 AC134860.5-201ENSMUST00000225071 1249 ntBASIC17.99■□□□□ 0.47
Clcn6O35454 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Clcn6O35454 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.99■□□□□ 0.47
Clcn6O35454 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn6O35454 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clcn6O35454 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Gm37751-201ENSMUST00000192440 1198 ntBASIC17.98■□□□□ 0.47
Clcn6O35454 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Clcn6O35454 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.98■□□□□ 0.47
Clcn6O35454 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Clcn6O35454 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn6O35454 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Clcn6O35454 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Clcn6O35454 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.97■□□□□ 0.47
Clcn6O35454 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
Clcn6O35454 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.97■□□□□ 0.47
Clcn6O35454 Gm44549-201ENSMUST00000208351 577 ntBASIC17.97■□□□□ 0.47
Clcn6O35454 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.97■□□□□ 0.47
Clcn6O35454 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.97■□□□□ 0.47
Clcn6O35454 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clcn6O35454 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn6O35454 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.97■□□□□ 0.47
Clcn6O35454 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.96■□□□□ 0.47
Clcn6O35454 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Clcn6O35454 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.96■□□□□ 0.47
Clcn6O35454 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.96■□□□□ 0.47
Clcn6O35454 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms