Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp35M0QWN7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp35M0QWN7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp35M0QWN7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp35M0QWN7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp35M0QWN7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp35M0QWN7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp35M0QWN7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp35M0QWN7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp35M0QWN7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp35M0QWN7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp35M0QWN7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp35M0QWN7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp35M0QWN7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp35M0QWN7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp35M0QWN7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp35M0QWN7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp35M0QWN7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.06■□□□□ 0.48
Usp35M0QWN7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Gm37025-201ENSMUST00000195159 829 ntBASIC18.06■□□□□ 0.48
Usp35M0QWN7 Gm9731-201ENSMUST00000209480 747 ntBASIC18.06■□□□□ 0.48
Usp35M0QWN7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp35M0QWN7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Gm25016-201ENSMUST00000158399 131 ntBASIC18.05■□□□□ 0.48
Usp35M0QWN7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp35M0QWN7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.05■□□□□ 0.48
Usp35M0QWN7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp35M0QWN7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.04■□□□□ 0.48
Usp35M0QWN7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp35M0QWN7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Gm7370-201ENSMUST00000219471 767 ntBASIC18.04■□□□□ 0.48
Usp35M0QWN7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms