Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Gm13474-201ENSMUST00000122466 815 ntBASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm10553J3QPF1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Gm10553J3QPF1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Gm10553J3QPF1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.9□□□□□ -0.35
Gm10553J3QPF1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Gm10553J3QPF1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.89□□□□□ -0.35
Gm10553J3QPF1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Gm7213-201ENSMUST00000215977 950 ntBASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm10553J3QPF1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Gm27000-201ENSMUST00000182943 842 ntBASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm10553J3QPF1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Gm22697-201ENSMUST00000175194 63 ntBASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm10553J3QPF1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Gm18101-201ENSMUST00000215769 548 ntBASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.86□□□□□ -0.35
Gm10553J3QPF1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms