Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Gm8349-201ENSMUST00000182720 1003 ntBASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 AC132104.2-201ENSMUST00000215011 266 ntBASIC30.65■■■□□ 2.5
Ccdc180J3QNE4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC30.64■■■□□ 2.5
Ccdc180J3QNE4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Gm45606-201ENSMUST00000209836 2795 ntBASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc180J3QNE4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Gm15442-201ENSMUST00000117905 1527 ntBASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc180J3QNE4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Gm12497-201ENSMUST00000138778 237 ntBASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ccdc180J3QNE4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Ccdc180J3QNE4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc180J3QNE4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc180J3QNE4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc180J3QNE4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc180J3QNE4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc180J3QNE4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC30.6■■■□□ 2.49
Ccdc180J3QNE4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Gm7862-201ENSMUST00000121461 292 ntBASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc180J3QNE4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc180J3QNE4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
Ccdc180J3QNE4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc180J3QNE4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc180J3QNE4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc180J3QNE4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc180J3QNE4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Ccdc180J3QNE4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc180J3QNE4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms