Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.37■■□□□ 1.01
ScaperF8VQ70 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ScaperF8VQ70 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ScaperF8VQ70 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ScaperF8VQ70 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ScaperF8VQ70 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.37■■□□□ 1.01
ScaperF8VQ70 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ScaperF8VQ70 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
ScaperF8VQ70 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Gm12895-201ENSMUST00000122214 226 ntBASIC21.36■■□□□ 1.01
ScaperF8VQ70 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.36■■□□□ 1.01
ScaperF8VQ70 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.36■■□□□ 1.01
ScaperF8VQ70 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ScaperF8VQ70 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.35■■□□□ 1.01
ScaperF8VQ70 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ScaperF8VQ70 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.35■■□□□ 1.01
ScaperF8VQ70 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.35■■□□□ 1.01
ScaperF8VQ70 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
ScaperF8VQ70 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.34■■□□□ 1.01
ScaperF8VQ70 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Gm18195-201ENSMUST00000207604 706 ntBASIC21.34■■□□□ 1.01
ScaperF8VQ70 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ScaperF8VQ70 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ScaperF8VQ70 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ScaperF8VQ70 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ScaperF8VQ70 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ScaperF8VQ70 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
ScaperF8VQ70 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
ScaperF8VQ70 Gm18206-201ENSMUST00000207027 926 ntBASIC21.33■■□□□ 1
ScaperF8VQ70 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.33■■□□□ 1
ScaperF8VQ70 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ScaperF8VQ70 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
ScaperF8VQ70 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.33■■□□□ 1
ScaperF8VQ70 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ScaperF8VQ70 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.32■■□□□ 1
ScaperF8VQ70 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.32■■□□□ 1
ScaperF8VQ70 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ScaperF8VQ70 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ScaperF8VQ70 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ScaperF8VQ70 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.32■■□□□ 1
ScaperF8VQ70 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ScaperF8VQ70 Gm27525-201ENSMUST00000184465 107 ntBASIC21.32■■□□□ 1
ScaperF8VQ70 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.32■■□□□ 1
ScaperF8VQ70 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ScaperF8VQ70 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ScaperF8VQ70 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.31■■□□□ 1
ScaperF8VQ70 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Gm11452-201ENSMUST00000122376 690 ntBASIC21.31■■□□□ 1
ScaperF8VQ70 Gm10052-201ENSMUST00000168019 960 ntBASIC21.31■■□□□ 1
ScaperF8VQ70 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.31■■□□□ 1
ScaperF8VQ70 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.31■■□□□ 1
ScaperF8VQ70 Gm7729-201ENSMUST00000050143 801 ntBASIC21.31■■□□□ 1
ScaperF8VQ70 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ScaperF8VQ70 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.31■■□□□ 1
ScaperF8VQ70 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ScaperF8VQ70 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ScaperF8VQ70 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ScaperF8VQ70 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms