Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Gm22240-201ENSMUST00000175225 82 ntBASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Gm27000-201ENSMUST00000182943 842 ntBASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh9F8VPK8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh9F8VPK8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh9F8VPK8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh9F8VPK8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.27■□□□□ 0.35
Pcdh9F8VPK8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh9F8VPK8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Pcdh9F8VPK8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh9F8VPK8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh9F8VPK8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh9F8VPK8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh9F8VPK8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms