Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC21.53■■□□□ 1.04
Col22a1E9Q7P1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.53■■□□□ 1.04
Col22a1E9Q7P1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.53■■□□□ 1.04
Col22a1E9Q7P1 Mir8112-201ENSMUST00000184382 131 ntBASIC21.53■■□□□ 1.04
Col22a1E9Q7P1 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.53■■□□□ 1.04
Col22a1E9Q7P1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col22a1E9Q7P1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col22a1E9Q7P1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Col22a1E9Q7P1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col22a1E9Q7P1 Gm7222-201ENSMUST00000117512 906 ntBASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Gm20949-201ENSMUST00000206478 952 ntBASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 AC139382.1-201ENSMUST00000221402 498 ntBASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col22a1E9Q7P1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Gm25745-201ENSMUST00000174945 133 ntBASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col22a1E9Q7P1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Gm44430-201ENSMUST00000203376 995 ntBASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Gm7506-201ENSMUST00000207758 815 ntBASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col22a1E9Q7P1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col22a1E9Q7P1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col22a1E9Q7P1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Gm7229-201ENSMUST00000214719 1007 ntBASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col22a1E9Q7P1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms