Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Shank1D3YZU1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Shank1D3YZU1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.05■□□□□ 0
Shank1D3YZU1 Mir5131-201ENSMUST00000175426 93 ntBASIC15.05■□□□□ 0
Shank1D3YZU1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.05■□□□□ 0
Shank1D3YZU1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.05■□□□□ 0
Shank1D3YZU1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.05■□□□□ 0
Shank1D3YZU1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.05■□□□□ 0
Shank1D3YZU1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shank1D3YZU1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shank1D3YZU1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shank1D3YZU1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Shank1D3YZU1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Shank1D3YZU1 Gm5364-201ENSMUST00000216789 889 ntBASIC15.05■□□□□ -0
Shank1D3YZU1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.05■□□□□ -0
Shank1D3YZU1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shank1D3YZU1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Shank1D3YZU1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Shank1D3YZU1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Shank1D3YZU1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shank1D3YZU1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.04■□□□□ -0
Shank1D3YZU1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Gm12350-201ENSMUST00000121208 462 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Mir8112-201ENSMUST00000184382 131 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Gm5264-201ENSMUST00000190584 848 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Gm18421-201ENSMUST00000204122 625 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Gm6376-201ENSMUST00000209407 580 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.04■□□□□ -0
Shank1D3YZU1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Shank1D3YZU1 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.04■□□□□ -0
Shank1D3YZU1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.04■□□□□ -0
Shank1D3YZU1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shank1D3YZU1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.03■□□□□ -0
Shank1D3YZU1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.03■□□□□ -0
Shank1D3YZU1 Gm27702-201ENSMUST00000184512 56 ntBASIC15.03■□□□□ -0
Shank1D3YZU1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.03■□□□□ -0
Shank1D3YZU1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.03■□□□□ -0
Shank1D3YZU1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shank1D3YZU1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Gm11779-201ENSMUST00000118541 368 ntBASIC15.02■□□□□ -0
Shank1D3YZU1 Rprl3-201ENSMUST00000157400 290 ntBASIC15.02■□□□□ -0
Shank1D3YZU1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.02■□□□□ -0
Shank1D3YZU1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.02■□□□□ -0
Shank1D3YZU1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.02■□□□□ -0
Shank1D3YZU1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shank1D3YZU1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Shank1D3YZU1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms