Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Mir2861-201ENSMUST00000175539 82 ntBASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Gm42778-201ENSMUST00000199644 553 ntBASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm12887B1AVM1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Gm2399-201ENSMUST00000104944 225 ntBASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm12887B1AVM1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm12887B1AVM1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Zfp783-201ENSMUST00000095946 670 ntBASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm12887B1AVM1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms