Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Gm11950-201ENSMUST00000121615 838 ntBASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Gm24841-201ENSMUST00000158676 357 ntBASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Gm27357-201ENSMUST00000183754 135 ntBASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Gm43514-201ENSMUST00000198852 424 ntBASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Mzt1-203ENSMUST00000227948 952 ntBASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.03■□□□□ 0.48
Sh2d4bA6X942 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.02■□□□□ 0.48
Sh2d4bA6X942 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh2d4bA6X942 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sh2d4bA6X942 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh2d4bA6X942 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh2d4bA6X942 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh2d4bA6X942 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.02■□□□□ 0.47
Sh2d4bA6X942 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2d4bA6X942 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Sh2d4bA6X942 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Sh2d4bA6X942 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18■□□□□ 0.47
Sh2d4bA6X942 Gm10418-201ENSMUST00000100943 576 ntBASIC18■□□□□ 0.47
Sh2d4bA6X942 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Gm24589-201ENSMUST00000116692 94 ntBASIC18■□□□□ 0.47
Sh2d4bA6X942 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18■□□□□ 0.47
Sh2d4bA6X942 Gm6443-201ENSMUST00000203599 874 ntBASIC18■□□□□ 0.47
Sh2d4bA6X942 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sh2d4bA6X942 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sh2d4bA6X942 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2d4bA6X942 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Gm18115-201ENSMUST00000221209 621 ntBASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Gm5867-201ENSMUST00000063197 592 ntBASIC17.99■□□□□ 0.47
Sh2d4bA6X942 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms