Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Mir2861-201ENSMUST00000175539 82 ntBASIC17.16■□□□□ 0.34
Gm5640A3KG49 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5640A3KG49 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.15■□□□□ 0.34
Gm5640A3KG49 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm5640A3KG49 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5640A3KG49 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Gm5640A3KG49 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Gm2399-201ENSMUST00000104944 225 ntBASIC17.14■□□□□ 0.33
Gm5640A3KG49 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Gm42778-201ENSMUST00000199644 553 ntBASIC17.14■□□□□ 0.33
Gm5640A3KG49 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5640A3KG49 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5640A3KG49 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5640A3KG49 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms