Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Mir6977-201ENSMUST00000184960 64 ntBASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Gm4459-201ENSMUST00000118750 468 ntBASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Shroom2A2ALU4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Gm27437-201ENSMUST00000183429 107 ntBASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom2A2ALU4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC26.6■■□□□ 1.85
Shroom2A2ALU4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC26.6■■□□□ 1.85
Shroom2A2ALU4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Gm17271-201ENSMUST00000165535 355 ntBASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC26.59■■□□□ 1.85
Shroom2A2ALU4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Golph3-205ENSMUST00000228671 2842 ntBASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Shroom2A2ALU4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC26.58■■□□□ 1.85
Shroom2A2ALU4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
Shroom2A2ALU4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC26.58■■□□□ 1.84
Shroom2A2ALU4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Shroom2A2ALU4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom2A2ALU4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Gm15653-201ENSMUST00000119247 907 ntBASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom2A2ALU4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Gm25948-201ENSMUST00000175334 112 ntBASIC26.55■■□□□ 1.84
Shroom2A2ALU4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom2A2ALU4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Gm5837-201ENSMUST00000191844 1369 ntBASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms