Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-4A0A0G2JG01 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-4A0A0G2JG01 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-4A0A0G2JG01 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-4A0A0G2JG01 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav13n-4A0A0G2JG01 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm7889-201ENSMUST00000185591 958 ntBASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm11539-201ENSMUST00000119837 557 ntBASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm13436-201ENSMUST00000120418 567 ntBASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Odf3b-204ENSMUST00000227834 930 ntBASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm29791-202ENSMUST00000207888 369 ntBASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms