Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Gm9987-201ENSMUST00000069768 567 ntBASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Mir1668-201ENSMUST00000184114 107 ntBASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atg4a-psA0A0G2JFS9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atg4a-psA0A0G2JFS9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms